Bioinformatics Software on HPC Clusters
========================================

This documentation is for HPC administrators and staff who run or support
many-core clusters and want to become familiar with common
bioinformatics tools and workflows: downloading public data, genomics and
RNA-seq pipelines, R-based analyses with job arrays, and more. Examples use SLURM, 
Biocontainers, and Singularity/Apptainer.

.. toctree::
   :maxdepth: 1
   :caption: Contents:

   introduction
   data-acquisition
   alphafold2
   alphafold3